Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ApoeP08226 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ApoeP08226 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.88■□□□□ 0.93
ApoeP08226 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ApoeP08226 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ApoeP08226 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ApoeP08226 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ApoeP08226 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ApoeP08226 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ApoeP08226 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.86■□□□□ 0.93
ApoeP08226 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ApoeP08226 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ApoeP08226 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.86■□□□□ 0.93
ApoeP08226 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.86■□□□□ 0.93
ApoeP08226 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ApoeP08226 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ApoeP08226 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
ApoeP08226 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
ApoeP08226 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ApoeP08226 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ApoeP08226 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ApoeP08226 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.84■□□□□ 0.93
ApoeP08226 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ApoeP08226 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ApoeP08226 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.83■□□□□ 0.92
ApoeP08226 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ApoeP08226 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ApoeP08226 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ApoeP08226 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ApoeP08226 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ApoeP08226 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.81■□□□□ 0.92
ApoeP08226 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ApoeP08226 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ApoeP08226 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ApoeP08226 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ApoeP08226 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ApoeP08226 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ApoeP08226 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.8■□□□□ 0.92
ApoeP08226 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ApoeP08226 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ApoeP08226 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ApoeP08226 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ApoeP08226 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.8■□□□□ 0.92
ApoeP08226 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ApoeP08226 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ApoeP08226 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ApoeP08226 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ApoeP08226 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ApoeP08226 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.79■□□□□ 0.92
ApoeP08226 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ApoeP08226 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
ApoeP08226 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ApoeP08226 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ApoeP08226 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ApoeP08226 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.79■□□□□ 0.92
ApoeP08226 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ApoeP08226 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
ApoeP08226 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.78■□□□□ 0.92
ApoeP08226 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ApoeP08226 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ApoeP08226 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ApoeP08226 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ApoeP08226 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ApoeP08226 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ApoeP08226 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.77■□□□□ 0.92
ApoeP08226 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ApoeP08226 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ApoeP08226 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ApoeP08226 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ApoeP08226 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ApoeP08226 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ApoeP08226 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ApoeP08226 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.75■□□□□ 0.91
ApoeP08226 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ApoeP08226 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ApoeP08226 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ApoeP08226 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ApoeP08226 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.74■□□□□ 0.91
ApoeP08226 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ApoeP08226 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ApoeP08226 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ApoeP08226 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.73■□□□□ 0.91
ApoeP08226 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ApoeP08226 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ApoeP08226 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ApoeP08226 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ApoeP08226 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ApoeP08226 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ApoeP08226 Gm22567-201ENSMUST00000175542 342 ntBASIC20.72■□□□□ 0.91
ApoeP08226 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ApoeP08226 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ApoeP08226 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ApoeP08226 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.71■□□□□ 0.91
ApoeP08226 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ApoeP08226 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ApoeP08226 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ApoeP08226 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ApoeP08226 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ApoeP08226 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ApoeP08226 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms