Protein–RNA interactions for Protein: P08046

Egr1, Early growth response protein 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Egr1P08046 Gm12821-201ENSMUST00000120022 600 ntBASIC21.1■□□□□ 0.97
Egr1P08046 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.1■□□□□ 0.97
Egr1P08046 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.1■□□□□ 0.97
Egr1P08046 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Egr1P08046 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Egr1P08046 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Egr1P08046 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Egr1P08046 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Egr1P08046 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Egr1P08046 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Egr1P08046 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Egr1P08046 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Egr1P08046 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Egr1P08046 Gm8495-201ENSMUST00000188740 694 ntBASIC21.06■□□□□ 0.96
Egr1P08046 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Egr1P08046 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Egr1P08046 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.05■□□□□ 0.96
Egr1P08046 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Egr1P08046 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.05■□□□□ 0.96
Egr1P08046 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.05■□□□□ 0.96
Egr1P08046 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Egr1P08046 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Egr1P08046 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.04■□□□□ 0.96
Egr1P08046 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Egr1P08046 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Egr1P08046 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Egr1P08046 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Egr1P08046 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Egr1P08046 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Egr1P08046 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Egr1P08046 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Egr1P08046 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.02■□□□□ 0.96
Egr1P08046 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Egr1P08046 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Egr1P08046 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Egr1P08046 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Egr1P08046 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.01■□□□□ 0.95
Egr1P08046 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.01■□□□□ 0.95
Egr1P08046 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Egr1P08046 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Egr1P08046 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Egr1P08046 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21■□□□□ 0.95
Egr1P08046 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21■□□□□ 0.95
Egr1P08046 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21■□□□□ 0.95
Egr1P08046 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21■□□□□ 0.95
Egr1P08046 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Egr1P08046 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21■□□□□ 0.95
Egr1P08046 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Egr1P08046 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Egr1P08046 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Egr1P08046 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.99■□□□□ 0.95
Egr1P08046 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.99■□□□□ 0.95
Egr1P08046 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Egr1P08046 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.99■□□□□ 0.95
Egr1P08046 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Egr1P08046 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Egr1P08046 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Egr1P08046 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Egr1P08046 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Egr1P08046 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Egr1P08046 Gm12922-201ENSMUST00000120626 809 ntBASIC20.98■□□□□ 0.95
Egr1P08046 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Egr1P08046 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Egr1P08046 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Egr1P08046 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Egr1P08046 Gm18284-201ENSMUST00000172604 624 ntBASIC20.97■□□□□ 0.95
Egr1P08046 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Egr1P08046 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Egr1P08046 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Egr1P08046 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Egr1P08046 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.96■□□□□ 0.95
Egr1P08046 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Egr1P08046 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Egr1P08046 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Egr1P08046 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
Egr1P08046 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Egr1P08046 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Egr1P08046 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Egr1P08046 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.95■□□□□ 0.94
Egr1P08046 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.95■□□□□ 0.94
Egr1P08046 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Egr1P08046 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Egr1P08046 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.94■□□□□ 0.94
Egr1P08046 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Egr1P08046 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.94■□□□□ 0.94
Egr1P08046 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Egr1P08046 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Egr1P08046 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Egr1P08046 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Egr1P08046 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Egr1P08046 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Egr1P08046 Gm40881-201ENSMUST00000223397 166 ntBASIC20.93■□□□□ 0.94
Egr1P08046 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Egr1P08046 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Egr1P08046 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Egr1P08046 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Egr1P08046 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.92■□□□□ 0.94
Egr1P08046 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Egr1P08046 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Egr1P08046 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms