Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.73■□□□□ 0.75
P06344 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
P06344 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P06344 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.71■□□□□ 0.75
P06344 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
P06344 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
P06344 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
P06344 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.71■□□□□ 0.75
P06344 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P06344 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
P06344 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
P06344 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
P06344 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
P06344 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
P06344 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
P06344 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.7■□□□□ 0.74
P06344 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
P06344 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
P06344 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
P06344 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P06344 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P06344 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P06344 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
P06344 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
P06344 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
P06344 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P06344 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
P06344 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.69■□□□□ 0.74
P06344 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
P06344 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
P06344 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
P06344 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
P06344 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P06344 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P06344 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.67■□□□□ 0.74
P06344 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
P06344 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P06344 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P06344 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
P06344 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
P06344 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P06344 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P06344 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P06344 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P06344 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P06344 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.66■□□□□ 0.74
P06344 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P06344 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06344 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
P06344 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06344 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.65■□□□□ 0.74
P06344 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P06344 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
P06344 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06344 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06344 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
P06344 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06344 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06344 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P06344 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P06344 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P06344 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
P06344 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
P06344 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P06344 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
P06344 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P06344 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.62■□□□□ 0.73
P06344 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P06344 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
P06344 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
P06344 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
P06344 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P06344 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
P06344 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
P06344 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
P06344 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
P06344 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P06344 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.6■□□□□ 0.73
P06344 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
P06344 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P06344 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P06344 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
P06344 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P06344 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
P06344 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P06344 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P06344 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
P06344 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
P06344 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
P06344 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.58■□□□□ 0.72
P06344 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.58■□□□□ 0.72
P06344 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
P06344 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
P06344 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
P06344 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
P06344 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
P06344 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
P06344 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
P06344 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
P06344 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms