Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
P06336 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
P06336 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
P06336 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.41■□□□□ 0.86
P06336 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
P06336 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
P06336 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
P06336 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.4■□□□□ 0.86
P06336 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
P06336 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P06336 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P06336 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
P06336 Cap2-205ENSMUST00000225824 1634 ntBASIC20.39■□□□□ 0.86
P06336 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.39■□□□□ 0.85
P06336 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.39■□□□□ 0.85
P06336 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P06336 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P06336 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
P06336 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.38■□□□□ 0.85
P06336 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.38■□□□□ 0.85
P06336 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P06336 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
P06336 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.37■□□□□ 0.85
P06336 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
P06336 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P06336 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.37■□□□□ 0.85
P06336 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P06336 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P06336 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06336 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06336 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
P06336 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06336 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06336 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06336 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06336 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06336 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
P06336 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P06336 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P06336 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P06336 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P06336 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P06336 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
P06336 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P06336 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
P06336 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
P06336 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P06336 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
P06336 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P06336 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
P06336 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
P06336 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
P06336 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
P06336 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
P06336 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
P06336 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P06336 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
P06336 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06336 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06336 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
P06336 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06336 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06336 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.31■□□□□ 0.84
P06336 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06336 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
P06336 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P06336 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P06336 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
P06336 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P06336 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P06336 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P06336 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.3■□□□□ 0.84
P06336 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P06336 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P06336 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
P06336 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
P06336 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.29■□□□□ 0.84
P06336 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
P06336 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P06336 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
P06336 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
P06336 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.28■□□□□ 0.84
P06336 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
P06336 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P06336 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
P06336 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
P06336 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
P06336 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.26■□□□□ 0.83
P06336 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P06336 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
P06336 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P06336 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P06336 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.25■□□□□ 0.83
P06336 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P06336 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.25■□□□□ 0.83
P06336 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
P06336 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P06336 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P06336 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.24■□□□□ 0.83
P06336 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms