Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh12O55134 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh12O55134 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh12O55134 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh12O55134 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh12O55134 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh12O55134 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh12O55134 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.96■□□□□ 0.79
Pcdh12O55134 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh12O55134 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.96■□□□□ 0.79
Pcdh12O55134 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh12O55134 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh12O55134 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh12O55134 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh12O55134 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Pcdh12O55134 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh12O55134 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh12O55134 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh12O55134 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh12O55134 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh12O55134 Cap2-205ENSMUST00000225824 1634 ntBASIC19.94■□□□□ 0.78
Pcdh12O55134 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Pcdh12O55134 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh12O55134 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh12O55134 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pcdh12O55134 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh12O55134 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh12O55134 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.94■□□□□ 0.78
Pcdh12O55134 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.94■□□□□ 0.78
Pcdh12O55134 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh12O55134 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Pcdh12O55134 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh12O55134 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.93■□□□□ 0.78
Pcdh12O55134 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh12O55134 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh12O55134 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh12O55134 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh12O55134 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdh12O55134 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh12O55134 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh12O55134 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh12O55134 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh12O55134 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh12O55134 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh12O55134 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh12O55134 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.92■□□□□ 0.78
Pcdh12O55134 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Pcdh12O55134 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh12O55134 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh12O55134 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh12O55134 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh12O55134 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh12O55134 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.91■□□□□ 0.78
Pcdh12O55134 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.91■□□□□ 0.78
Pcdh12O55134 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.91■□□□□ 0.78
Pcdh12O55134 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh12O55134 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh12O55134 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh12O55134 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh12O55134 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh12O55134 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.9■□□□□ 0.78
Pcdh12O55134 Gm12366-201ENSMUST00000121722 873 ntBASIC19.9■□□□□ 0.78
Pcdh12O55134 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.9■□□□□ 0.78
Pcdh12O55134 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdh12O55134 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.9■□□□□ 0.78
Pcdh12O55134 Gm5786-201ENSMUST00000085368 882 ntBASIC19.9■□□□□ 0.78
Pcdh12O55134 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh12O55134 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh12O55134 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdh12O55134 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh12O55134 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh12O55134 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh12O55134 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
Pcdh12O55134 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh12O55134 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh12O55134 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh12O55134 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh12O55134 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh12O55134 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.87■□□□□ 0.77
Pcdh12O55134 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdh12O55134 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh12O55134 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh12O55134 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh12O55134 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh12O55134 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdh12O55134 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdh12O55134 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.87■□□□□ 0.77
Pcdh12O55134 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh12O55134 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdh12O55134 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh12O55134 Gm27502-201ENSMUST00000183495 199 ntBASIC19.86■□□□□ 0.77
Pcdh12O55134 Gm44428-201ENSMUST00000204474 874 ntBASIC19.86■□□□□ 0.77
Pcdh12O55134 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh12O55134 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh12O55134 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh12O55134 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh12O55134 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh12O55134 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh12O55134 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Pcdh12O55134 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms