Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.09■□□□□ 0.81
Matn3O35701 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Matn3O35701 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Matn3O35701 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Matn3O35701 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Matn3O35701 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.08■□□□□ 0.81
Matn3O35701 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Matn3O35701 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Matn3O35701 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Matn3O35701 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.07■□□□□ 0.8
Matn3O35701 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Matn3O35701 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Matn3O35701 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Matn3O35701 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Matn3O35701 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Matn3O35701 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Matn3O35701 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.06■□□□□ 0.8
Matn3O35701 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
Matn3O35701 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Matn3O35701 Gm24970-201ENSMUST00000175582 82 ntBASIC20.05■□□□□ 0.8
Matn3O35701 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.05■□□□□ 0.8
Matn3O35701 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Matn3O35701 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Matn3O35701 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Matn3O35701 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Matn3O35701 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.04■□□□□ 0.8
Matn3O35701 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.04■□□□□ 0.8
Matn3O35701 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Matn3O35701 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Matn3O35701 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Matn3O35701 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Matn3O35701 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Matn3O35701 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Matn3O35701 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Matn3O35701 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Matn3O35701 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.02■□□□□ 0.8
Matn3O35701 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Matn3O35701 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Matn3O35701 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.02■□□□□ 0.79
Matn3O35701 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Matn3O35701 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Matn3O35701 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Matn3O35701 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.01■□□□□ 0.79
Matn3O35701 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Matn3O35701 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Matn3O35701 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20■□□□□ 0.79
Matn3O35701 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20■□□□□ 0.79
Matn3O35701 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20■□□□□ 0.79
Matn3O35701 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20■□□□□ 0.79
Matn3O35701 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Matn3O35701 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.99■□□□□ 0.79
Matn3O35701 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Matn3O35701 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Matn3O35701 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Matn3O35701 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Matn3O35701 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Matn3O35701 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Matn3O35701 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Matn3O35701 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Matn3O35701 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Matn3O35701 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.96■□□□□ 0.79
Matn3O35701 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Matn3O35701 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Matn3O35701 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Matn3O35701 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.96■□□□□ 0.79
Matn3O35701 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Matn3O35701 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.95■□□□□ 0.78
Matn3O35701 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Matn3O35701 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Matn3O35701 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Matn3O35701 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Matn3O35701 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Matn3O35701 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Matn3O35701 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Matn3O35701 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Matn3O35701 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Matn3O35701 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Matn3O35701 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.94■□□□□ 0.78
Matn3O35701 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Matn3O35701 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.94■□□□□ 0.78
Matn3O35701 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Matn3O35701 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Matn3O35701 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Matn3O35701 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.93■□□□□ 0.78
Matn3O35701 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Matn3O35701 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Matn3O35701 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.92■□□□□ 0.78
Matn3O35701 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Matn3O35701 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Matn3O35701 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Matn3O35701 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Matn3O35701 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Matn3O35701 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Matn3O35701 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Matn3O35701 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Matn3O35701 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Matn3O35701 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Matn3O35701 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Matn3O35701 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Matn3O35701 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms