Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Abca4O35600 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.58■■□□□ 1.05
Abca4O35600 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Abca4O35600 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Abca4O35600 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.58■■□□□ 1.04
Abca4O35600 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Abca4O35600 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Abca4O35600 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Abca4O35600 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Abca4O35600 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Abca4O35600 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Abca4O35600 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Abca4O35600 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.56■■□□□ 1.04
Abca4O35600 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Abca4O35600 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Abca4O35600 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.55■■□□□ 1.04
Abca4O35600 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Abca4O35600 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.55■■□□□ 1.04
Abca4O35600 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Abca4O35600 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Abca4O35600 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Abca4O35600 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Abca4O35600 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Abca4O35600 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.54■■□□□ 1.04
Abca4O35600 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.54■■□□□ 1.04
Abca4O35600 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Abca4O35600 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Abca4O35600 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.54■■□□□ 1.04
Abca4O35600 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.54■■□□□ 1.04
Abca4O35600 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Abca4O35600 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Abca4O35600 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abca4O35600 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.53■■□□□ 1.04
Abca4O35600 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.53■■□□□ 1.04
Abca4O35600 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Abca4O35600 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Abca4O35600 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abca4O35600 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.53■■□□□ 1.04
Abca4O35600 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Abca4O35600 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Abca4O35600 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.52■■□□□ 1.04
Abca4O35600 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Abca4O35600 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Abca4O35600 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Abca4O35600 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Abca4O35600 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Abca4O35600 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Abca4O35600 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Abca4O35600 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.5■■□□□ 1.03
Abca4O35600 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Abca4O35600 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Abca4O35600 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Abca4O35600 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.5■■□□□ 1.03
Abca4O35600 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Abca4O35600 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.49■■□□□ 1.03
Abca4O35600 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Abca4O35600 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Abca4O35600 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Abca4O35600 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abca4O35600 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abca4O35600 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abca4O35600 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abca4O35600 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abca4O35600 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abca4O35600 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abca4O35600 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abca4O35600 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abca4O35600 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.47■■□□□ 1.03
Abca4O35600 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abca4O35600 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abca4O35600 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Abca4O35600 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abca4O35600 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Abca4O35600 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.46■■□□□ 1.03
Abca4O35600 Golgb1-201ENSMUST00000023534 498 ntBASIC21.46■■□□□ 1.03
Abca4O35600 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Abca4O35600 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.45■■□□□ 1.02
Abca4O35600 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Abca4O35600 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.45■■□□□ 1.02
Abca4O35600 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.45■■□□□ 1.02
Abca4O35600 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Abca4O35600 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
Abca4O35600 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.44■■□□□ 1.02
Abca4O35600 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abca4O35600 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abca4O35600 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abca4O35600 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abca4O35600 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.44■■□□□ 1.02
Abca4O35600 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.44■■□□□ 1.02
Abca4O35600 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.44■■□□□ 1.02
Abca4O35600 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.43■■□□□ 1.02
Abca4O35600 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Abca4O35600 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Abca4O35600 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Abca4O35600 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Abca4O35600 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.43■■□□□ 1.02
Abca4O35600 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Abca4O35600 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Abca4O35600 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Abca4O35600 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms