Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.23■□□□□ 0.35
Tnfsf11O35235 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf11O35235 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.23■□□□□ 0.35
Tnfsf11O35235 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf11O35235 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf11O35235 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf11O35235 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Tnfsf11O35235 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.23■□□□□ 0.35
Tnfsf11O35235 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Tnfsf11O35235 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf11O35235 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
Tnfsf11O35235 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Tnfsf11O35235 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf11O35235 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf11O35235 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf11O35235 Gm45855-201ENSMUST00000212546 880 ntBASIC17.21■□□□□ 0.35
Tnfsf11O35235 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfsf11O35235 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Tnfsf11O35235 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf11O35235 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Tnfsf11O35235 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Tnfsf11O35235 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf11O35235 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf11O35235 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfsf11O35235 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Tnfsf11O35235 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Tnfsf11O35235 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Tnfsf11O35235 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tnfsf11O35235 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Tnfsf11O35235 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfsf11O35235 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf11O35235 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf11O35235 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf11O35235 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf11O35235 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf11O35235 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Tnfsf11O35235 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf11O35235 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf11O35235 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf11O35235 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfsf11O35235 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Tnfsf11O35235 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf11O35235 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf11O35235 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.16■□□□□ 0.34
Tnfsf11O35235 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf11O35235 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf11O35235 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf11O35235 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf11O35235 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Tnfsf11O35235 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf11O35235 Notumos-201ENSMUST00000151998 2659 ntBASIC17.15■□□□□ 0.34
Tnfsf11O35235 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsf11O35235 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsf11O35235 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsf11O35235 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsf11O35235 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsf11O35235 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf11O35235 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf11O35235 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfsf11O35235 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf11O35235 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf11O35235 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf11O35235 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf11O35235 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf11O35235 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf11O35235 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnfsf11O35235 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf11O35235 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf11O35235 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf11O35235 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf11O35235 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf11O35235 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf11O35235 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf11O35235 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.1■□□□□ 0.33
Tnfsf11O35235 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf11O35235 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf11O35235 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Tnfsf11O35235 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf11O35235 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf11O35235 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf11O35235 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf11O35235 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfsf11O35235 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf11O35235 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfsf11O35235 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf11O35235 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf11O35235 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms