Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
9930021J03RikH3BKP8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
9930021J03RikH3BKP8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
9930021J03RikH3BKP8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
9930021J03RikH3BKP8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.71■□□□□ 0.91
9930021J03RikH3BKP8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
9930021J03RikH3BKP8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
9930021J03RikH3BKP8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
9930021J03RikH3BKP8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.7■□□□□ 0.9
9930021J03RikH3BKP8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.7■□□□□ 0.9
9930021J03RikH3BKP8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
9930021J03RikH3BKP8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
9930021J03RikH3BKP8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
9930021J03RikH3BKP8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
9930021J03RikH3BKP8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
9930021J03RikH3BKP8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
9930021J03RikH3BKP8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
9930021J03RikH3BKP8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
9930021J03RikH3BKP8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.68■□□□□ 0.9
9930021J03RikH3BKP8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
9930021J03RikH3BKP8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
9930021J03RikH3BKP8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
9930021J03RikH3BKP8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
9930021J03RikH3BKP8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
9930021J03RikH3BKP8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
9930021J03RikH3BKP8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.66■□□□□ 0.9
9930021J03RikH3BKP8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
9930021J03RikH3BKP8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.66■□□□□ 0.9
9930021J03RikH3BKP8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
9930021J03RikH3BKP8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
9930021J03RikH3BKP8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
9930021J03RikH3BKP8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
9930021J03RikH3BKP8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.65■□□□□ 0.9
9930021J03RikH3BKP8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
9930021J03RikH3BKP8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
9930021J03RikH3BKP8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
9930021J03RikH3BKP8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.65■□□□□ 0.9
9930021J03RikH3BKP8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
9930021J03RikH3BKP8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
9930021J03RikH3BKP8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.64■□□□□ 0.89
9930021J03RikH3BKP8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
9930021J03RikH3BKP8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
9930021J03RikH3BKP8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
9930021J03RikH3BKP8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
9930021J03RikH3BKP8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
9930021J03RikH3BKP8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
9930021J03RikH3BKP8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
9930021J03RikH3BKP8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
9930021J03RikH3BKP8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
9930021J03RikH3BKP8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
9930021J03RikH3BKP8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
9930021J03RikH3BKP8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
9930021J03RikH3BKP8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
9930021J03RikH3BKP8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
9930021J03RikH3BKP8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
9930021J03RikH3BKP8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.61■□□□□ 0.89
9930021J03RikH3BKP8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
9930021J03RikH3BKP8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
9930021J03RikH3BKP8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
9930021J03RikH3BKP8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.61■□□□□ 0.89
9930021J03RikH3BKP8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
9930021J03RikH3BKP8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
9930021J03RikH3BKP8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
9930021J03RikH3BKP8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
9930021J03RikH3BKP8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
9930021J03RikH3BKP8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
9930021J03RikH3BKP8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
9930021J03RikH3BKP8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
9930021J03RikH3BKP8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
9930021J03RikH3BKP8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
9930021J03RikH3BKP8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
9930021J03RikH3BKP8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
9930021J03RikH3BKP8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
9930021J03RikH3BKP8 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.58■□□□□ 0.89
9930021J03RikH3BKP8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
9930021J03RikH3BKP8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
9930021J03RikH3BKP8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
9930021J03RikH3BKP8 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.57■□□□□ 0.88
9930021J03RikH3BKP8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
9930021J03RikH3BKP8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
9930021J03RikH3BKP8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
9930021J03RikH3BKP8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
9930021J03RikH3BKP8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
9930021J03RikH3BKP8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
9930021J03RikH3BKP8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
9930021J03RikH3BKP8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.56■□□□□ 0.88
9930021J03RikH3BKP8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.56■□□□□ 0.88
9930021J03RikH3BKP8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
9930021J03RikH3BKP8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
9930021J03RikH3BKP8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
9930021J03RikH3BKP8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
9930021J03RikH3BKP8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
9930021J03RikH3BKP8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
9930021J03RikH3BKP8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
9930021J03RikH3BKP8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
9930021J03RikH3BKP8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
9930021J03RikH3BKP8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
9930021J03RikH3BKP8 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.54■□□□□ 0.88
9930021J03RikH3BKP8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
9930021J03RikH3BKP8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms