Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc188F6WEU2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Ccdc188F6WEU2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Ccdc188F6WEU2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc188F6WEU2 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.26■■□□□ 1.31
Ccdc188F6WEU2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc188F6WEU2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.25■■□□□ 1.31
Ccdc188F6WEU2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ccdc188F6WEU2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.25■■□□□ 1.31
Ccdc188F6WEU2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.25■■□□□ 1.31
Ccdc188F6WEU2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc188F6WEU2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc188F6WEU2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
Ccdc188F6WEU2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Ccdc188F6WEU2 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.24■■□□□ 1.31
Ccdc188F6WEU2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
Ccdc188F6WEU2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc188F6WEU2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc188F6WEU2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Ccdc188F6WEU2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.23■■□□□ 1.31
Ccdc188F6WEU2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Ccdc188F6WEU2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc188F6WEU2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc188F6WEU2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc188F6WEU2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.22■■□□□ 1.31
Ccdc188F6WEU2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Ccdc188F6WEU2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ccdc188F6WEU2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc188F6WEU2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc188F6WEU2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc188F6WEU2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc188F6WEU2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc188F6WEU2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.21■■□□□ 1.31
Ccdc188F6WEU2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc188F6WEU2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc188F6WEU2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.2■■□□□ 1.3
Ccdc188F6WEU2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
Ccdc188F6WEU2 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.2■■□□□ 1.3
Ccdc188F6WEU2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc188F6WEU2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc188F6WEU2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC23.19■■□□□ 1.3
Ccdc188F6WEU2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc188F6WEU2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc188F6WEU2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ccdc188F6WEU2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.18■■□□□ 1.3
Ccdc188F6WEU2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
Ccdc188F6WEU2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.18■■□□□ 1.3
Ccdc188F6WEU2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc188F6WEU2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc188F6WEU2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc188F6WEU2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.17■■□□□ 1.3
Ccdc188F6WEU2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc188F6WEU2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc188F6WEU2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc188F6WEU2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc188F6WEU2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.16■■□□□ 1.3
Ccdc188F6WEU2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
Ccdc188F6WEU2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc188F6WEU2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.16■■□□□ 1.3
Ccdc188F6WEU2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc188F6WEU2 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.15■■□□□ 1.3
Ccdc188F6WEU2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc188F6WEU2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc188F6WEU2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc188F6WEU2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc188F6WEU2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.13■■□□□ 1.29
Ccdc188F6WEU2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc188F6WEU2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc188F6WEU2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc188F6WEU2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Ccdc188F6WEU2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.11■■□□□ 1.29
Ccdc188F6WEU2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc188F6WEU2 Gm40881-201ENSMUST00000223397 166 ntBASIC23.11■■□□□ 1.29
Ccdc188F6WEU2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc188F6WEU2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc188F6WEU2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Ccdc188F6WEU2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc188F6WEU2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc188F6WEU2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
Ccdc188F6WEU2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc188F6WEU2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc188F6WEU2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc188F6WEU2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc188F6WEU2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
Ccdc188F6WEU2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.08■■□□□ 1.29
Ccdc188F6WEU2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc188F6WEU2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc188F6WEU2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ccdc188F6WEU2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ccdc188F6WEU2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.07■■□□□ 1.28
Ccdc188F6WEU2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ccdc188F6WEU2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.07■■□□□ 1.28
Ccdc188F6WEU2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.07■■□□□ 1.28
Ccdc188F6WEU2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc188F6WEU2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc188F6WEU2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc188F6WEU2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Ccdc188F6WEU2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc188F6WEU2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc188F6WEU2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 497.2 ms