Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Shank1D3YZU1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Shank1D3YZU1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shank1D3YZU1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shank1D3YZU1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shank1D3YZU1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shank1D3YZU1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Shank1D3YZU1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shank1D3YZU1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shank1D3YZU1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shank1D3YZU1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.94■□□□□ 0.78
Shank1D3YZU1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shank1D3YZU1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shank1D3YZU1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.94■□□□□ 0.78
Shank1D3YZU1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Shank1D3YZU1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Shank1D3YZU1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Shank1D3YZU1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shank1D3YZU1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shank1D3YZU1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.93■□□□□ 0.78
Shank1D3YZU1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Shank1D3YZU1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shank1D3YZU1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shank1D3YZU1 Gm13241-201ENSMUST00000094493 780 ntBASIC19.92■□□□□ 0.78
Shank1D3YZU1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank1D3YZU1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shank1D3YZU1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Shank1D3YZU1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shank1D3YZU1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shank1D3YZU1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.91■□□□□ 0.78
Shank1D3YZU1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shank1D3YZU1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shank1D3YZU1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shank1D3YZU1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shank1D3YZU1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Shank1D3YZU1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.89■□□□□ 0.77
Shank1D3YZU1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shank1D3YZU1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shank1D3YZU1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shank1D3YZU1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shank1D3YZU1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shank1D3YZU1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shank1D3YZU1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shank1D3YZU1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shank1D3YZU1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shank1D3YZU1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shank1D3YZU1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shank1D3YZU1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.86■□□□□ 0.77
Shank1D3YZU1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Shank1D3YZU1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shank1D3YZU1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.85■□□□□ 0.77
Shank1D3YZU1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Shank1D3YZU1 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.85■□□□□ 0.77
Shank1D3YZU1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shank1D3YZU1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shank1D3YZU1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shank1D3YZU1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shank1D3YZU1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shank1D3YZU1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.83■□□□□ 0.77
Shank1D3YZU1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Shank1D3YZU1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Shank1D3YZU1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shank1D3YZU1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Shank1D3YZU1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank1D3YZU1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank1D3YZU1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank1D3YZU1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank1D3YZU1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank1D3YZU1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank1D3YZU1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.81■□□□□ 0.76
Shank1D3YZU1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shank1D3YZU1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Shank1D3YZU1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.81■□□□□ 0.76
Shank1D3YZU1 Gm9847-201ENSMUST00000052528 599 ntBASIC19.81■□□□□ 0.76
Shank1D3YZU1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shank1D3YZU1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shank1D3YZU1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank1D3YZU1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank1D3YZU1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.79■□□□□ 0.76
Shank1D3YZU1 Gm7417-201ENSMUST00000192950 473 ntBASIC19.79■□□□□ 0.76
Shank1D3YZU1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shank1D3YZU1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Shank1D3YZU1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shank1D3YZU1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.78■□□□□ 0.76
Shank1D3YZU1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shank1D3YZU1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Shank1D3YZU1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shank1D3YZU1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Shank1D3YZU1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shank1D3YZU1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Shank1D3YZU1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Shank1D3YZU1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.77■□□□□ 0.75
Shank1D3YZU1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shank1D3YZU1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shank1D3YZU1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shank1D3YZU1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Shank1D3YZU1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.76■□□□□ 0.75
Shank1D3YZU1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.76■□□□□ 0.75
Shank1D3YZU1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shank1D3YZU1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms