Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a5A6H584 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Col6a5A6H584 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Col6a5A6H584 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.35■□□□□ 0.37
Col6a5A6H584 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a5A6H584 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a5A6H584 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a5A6H584 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.34■□□□□ 0.37
Col6a5A6H584 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.34■□□□□ 0.37
Col6a5A6H584 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a5A6H584 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a5A6H584 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.34■□□□□ 0.37
Col6a5A6H584 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col6a5A6H584 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col6a5A6H584 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col6a5A6H584 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Col6a5A6H584 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col6a5A6H584 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a5A6H584 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.32■□□□□ 0.36
Col6a5A6H584 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a5A6H584 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a5A6H584 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a5A6H584 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a5A6H584 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a5A6H584 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a5A6H584 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a5A6H584 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.31■□□□□ 0.36
Col6a5A6H584 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.31■□□□□ 0.36
Col6a5A6H584 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a5A6H584 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col6a5A6H584 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.3■□□□□ 0.36
Col6a5A6H584 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col6a5A6H584 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col6a5A6H584 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.3■□□□□ 0.36
Col6a5A6H584 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.3■□□□□ 0.36
Col6a5A6H584 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col6a5A6H584 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col6a5A6H584 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col6a5A6H584 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col6a5A6H584 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col6a5A6H584 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col6a5A6H584 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Col6a5A6H584 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.28■□□□□ 0.36
Col6a5A6H584 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a5A6H584 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.28■□□□□ 0.36
Col6a5A6H584 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a5A6H584 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col6a5A6H584 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col6a5A6H584 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col6a5A6H584 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col6a5A6H584 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Col6a5A6H584 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.27■□□□□ 0.35
Col6a5A6H584 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col6a5A6H584 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col6a5A6H584 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.27■□□□□ 0.35
Col6a5A6H584 Gm27011-201ENSMUST00000182352 972 ntBASIC17.26■□□□□ 0.35
Col6a5A6H584 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a5A6H584 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Col6a5A6H584 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a5A6H584 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.26■□□□□ 0.35
Col6a5A6H584 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.26■□□□□ 0.35
Col6a5A6H584 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.26■□□□□ 0.35
Col6a5A6H584 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a5A6H584 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a5A6H584 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a5A6H584 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a5A6H584 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a5A6H584 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a5A6H584 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a5A6H584 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a5A6H584 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.25■□□□□ 0.35
Col6a5A6H584 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a5A6H584 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.25■□□□□ 0.35
Col6a5A6H584 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Col6a5A6H584 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a5A6H584 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a5A6H584 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a5A6H584 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a5A6H584 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a5A6H584 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a5A6H584 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.24■□□□□ 0.35
Col6a5A6H584 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a5A6H584 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.24■□□□□ 0.35
Col6a5A6H584 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col6a5A6H584 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a5A6H584 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a5A6H584 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a5A6H584 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a5A6H584 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.23■□□□□ 0.35
Col6a5A6H584 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a5A6H584 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.23■□□□□ 0.35
Col6a5A6H584 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a5A6H584 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col6a5A6H584 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.22■□□□□ 0.35
Col6a5A6H584 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a5A6H584 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a5A6H584 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a5A6H584 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Col6a5A6H584 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col6a5A6H584 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms