Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chd6A3KFM7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chd6A3KFM7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.68■□□□□ 0.58
Chd6A3KFM7 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.68■□□□□ 0.58
Chd6A3KFM7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd6A3KFM7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd6A3KFM7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.67■□□□□ 0.58
Chd6A3KFM7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd6A3KFM7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.66■□□□□ 0.58
Chd6A3KFM7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd6A3KFM7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd6A3KFM7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.65■□□□□ 0.58
Chd6A3KFM7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.65■□□□□ 0.58
Chd6A3KFM7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd6A3KFM7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd6A3KFM7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd6A3KFM7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd6A3KFM7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd6A3KFM7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd6A3KFM7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.65■□□□□ 0.58
Chd6A3KFM7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd6A3KFM7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd6A3KFM7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd6A3KFM7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chd6A3KFM7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.64■□□□□ 0.57
Chd6A3KFM7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd6A3KFM7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd6A3KFM7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chd6A3KFM7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd6A3KFM7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd6A3KFM7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd6A3KFM7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.63■□□□□ 0.57
Chd6A3KFM7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd6A3KFM7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd6A3KFM7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Chd6A3KFM7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.63■□□□□ 0.57
Chd6A3KFM7 Gm5874-201ENSMUST00000096101 508 ntBASIC18.63■□□□□ 0.57
Chd6A3KFM7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd6A3KFM7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chd6A3KFM7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd6A3KFM7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chd6A3KFM7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chd6A3KFM7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.62■□□□□ 0.57
Chd6A3KFM7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.62■□□□□ 0.57
Chd6A3KFM7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Chd6A3KFM7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.61■□□□□ 0.57
Chd6A3KFM7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd6A3KFM7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd6A3KFM7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd6A3KFM7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Chd6A3KFM7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.6■□□□□ 0.57
Chd6A3KFM7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd6A3KFM7 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.6■□□□□ 0.57
Chd6A3KFM7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd6A3KFM7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Chd6A3KFM7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chd6A3KFM7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd6A3KFM7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Chd6A3KFM7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chd6A3KFM7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Chd6A3KFM7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.59■□□□□ 0.57
Chd6A3KFM7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd6A3KFM7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.58■□□□□ 0.57
Chd6A3KFM7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chd6A3KFM7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd6A3KFM7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd6A3KFM7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd6A3KFM7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Chd6A3KFM7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd6A3KFM7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd6A3KFM7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd6A3KFM7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd6A3KFM7 Gm7291-201ENSMUST00000199147 382 ntBASIC18.57■□□□□ 0.56
Chd6A3KFM7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Chd6A3KFM7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.56■□□□□ 0.56
Chd6A3KFM7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd6A3KFM7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.55■□□□□ 0.56
Chd6A3KFM7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.55■□□□□ 0.56
Chd6A3KFM7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.55■□□□□ 0.56
Chd6A3KFM7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.55■□□□□ 0.56
Chd6A3KFM7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chd6A3KFM7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Chd6A3KFM7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd6A3KFM7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.54■□□□□ 0.56
Chd6A3KFM7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Chd6A3KFM7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Chd6A3KFM7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd6A3KFM7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.53■□□□□ 0.56
Chd6A3KFM7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.53■□□□□ 0.56
Chd6A3KFM7 Gm6139-201ENSMUST00000079261 882 ntBASIC18.53■□□□□ 0.56
Chd6A3KFM7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd6A3KFM7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd6A3KFM7 Gm26571-201ENSMUST00000181399 666 ntBASIC18.53■□□□□ 0.56
Chd6A3KFM7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd6A3KFM7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd6A3KFM7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chd6A3KFM7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd6A3KFM7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd6A3KFM7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd6A3KFM7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms