Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Igkv1-88A0A140T8N1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Igkv1-88A0A140T8N1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv1-88A0A140T8N1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv1-88A0A140T8N1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC14.54□□□□□ -0.08
Igkv1-88A0A140T8N1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Igkv1-88A0A140T8N1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Igkv1-88A0A140T8N1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv1-88A0A140T8N1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv1-88A0A140T8N1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC14.53□□□□□ -0.08
Igkv1-88A0A140T8N1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv1-88A0A140T8N1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv1-88A0A140T8N1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv1-88A0A140T8N1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.53□□□□□ -0.08
Igkv1-88A0A140T8N1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv1-88A0A140T8N1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv1-88A0A140T8N1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Igkv1-88A0A140T8N1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Igkv1-88A0A140T8N1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Igkv1-88A0A140T8N1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Igkv1-88A0A140T8N1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv1-88A0A140T8N1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv1-88A0A140T8N1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv1-88A0A140T8N1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Igkv1-88A0A140T8N1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv1-88A0A140T8N1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv1-88A0A140T8N1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.51□□□□□ -0.09
Igkv1-88A0A140T8N1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC14.51□□□□□ -0.09
Igkv1-88A0A140T8N1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv1-88A0A140T8N1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv1-88A0A140T8N1 Gm4419-202ENSMUST00000226239 1431 ntBASIC14.5□□□□□ -0.09
Igkv1-88A0A140T8N1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv1-88A0A140T8N1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv1-88A0A140T8N1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv1-88A0A140T8N1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv1-88A0A140T8N1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.5□□□□□ -0.09
Igkv1-88A0A140T8N1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Igkv1-88A0A140T8N1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv1-88A0A140T8N1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Igkv1-88A0A140T8N1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Igkv1-88A0A140T8N1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv1-88A0A140T8N1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC14.49□□□□□ -0.09
Igkv1-88A0A140T8N1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv1-88A0A140T8N1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv1-88A0A140T8N1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv1-88A0A140T8N1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv1-88A0A140T8N1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv1-88A0A140T8N1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv1-88A0A140T8N1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv1-88A0A140T8N1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14.48□□□□□ -0.09
Igkv1-88A0A140T8N1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv1-88A0A140T8N1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.48□□□□□ -0.09
Igkv1-88A0A140T8N1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv1-88A0A140T8N1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv1-88A0A140T8N1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.48□□□□□ -0.09
Igkv1-88A0A140T8N1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv1-88A0A140T8N1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Igkv1-88A0A140T8N1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv1-88A0A140T8N1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv1-88A0A140T8N1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Igkv1-88A0A140T8N1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv1-88A0A140T8N1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv1-88A0A140T8N1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Igkv1-88A0A140T8N1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv1-88A0A140T8N1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv1-88A0A140T8N1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv1-88A0A140T8N1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv1-88A0A140T8N1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv1-88A0A140T8N1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv1-88A0A140T8N1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv1-88A0A140T8N1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv1-88A0A140T8N1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Igkv1-88A0A140T8N1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC14.46□□□□□ -0.09
Igkv1-88A0A140T8N1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Igkv1-88A0A140T8N1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Igkv1-88A0A140T8N1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Igkv1-88A0A140T8N1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Igkv1-88A0A140T8N1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Igkv1-88A0A140T8N1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC14.45□□□□□ -0.1
Igkv1-88A0A140T8N1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv1-88A0A140T8N1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv1-88A0A140T8N1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv1-88A0A140T8N1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv1-88A0A140T8N1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv1-88A0A140T8N1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv1-88A0A140T8N1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv1-88A0A140T8N1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv1-88A0A140T8N1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv1-88A0A140T8N1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC14.44□□□□□ -0.1
Igkv1-88A0A140T8N1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv1-88A0A140T8N1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv1-88A0A140T8N1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Igkv1-88A0A140T8N1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv1-88A0A140T8N1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.43□□□□□ -0.1
Igkv1-88A0A140T8N1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv1-88A0A140T8N1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv1-88A0A140T8N1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Igkv1-88A0A140T8N1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv1-88A0A140T8N1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv1-88A0A140T8N1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms