Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Cfap99A0A140LIX9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Cfap99A0A140LIX9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Cfap99A0A140LIX9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cfap99A0A140LIX9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cfap99A0A140LIX9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Cfap99A0A140LIX9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Cfap99A0A140LIX9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.35■■□□□ 1.81
Cfap99A0A140LIX9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cfap99A0A140LIX9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Cfap99A0A140LIX9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Cfap99A0A140LIX9 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.34■■□□□ 1.81
Cfap99A0A140LIX9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Cfap99A0A140LIX9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.33■■□□□ 1.81
Cfap99A0A140LIX9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Cfap99A0A140LIX9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Cfap99A0A140LIX9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.33■■□□□ 1.81
Cfap99A0A140LIX9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.33■■□□□ 1.81
Cfap99A0A140LIX9 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.33■■□□□ 1.81
Cfap99A0A140LIX9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.33■■□□□ 1.81
Cfap99A0A140LIX9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cfap99A0A140LIX9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cfap99A0A140LIX9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Cfap99A0A140LIX9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cfap99A0A140LIX9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cfap99A0A140LIX9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Cfap99A0A140LIX9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cfap99A0A140LIX9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cfap99A0A140LIX9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Cfap99A0A140LIX9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cfap99A0A140LIX9 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.31■■□□□ 1.8
Cfap99A0A140LIX9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
Cfap99A0A140LIX9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cfap99A0A140LIX9 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.3■■□□□ 1.8
Cfap99A0A140LIX9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cfap99A0A140LIX9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Cfap99A0A140LIX9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.29■■□□□ 1.8
Cfap99A0A140LIX9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Cfap99A0A140LIX9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.29■■□□□ 1.8
Cfap99A0A140LIX9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.29■■□□□ 1.8
Cfap99A0A140LIX9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cfap99A0A140LIX9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
Cfap99A0A140LIX9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cfap99A0A140LIX9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.28■■□□□ 1.8
Cfap99A0A140LIX9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cfap99A0A140LIX9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
Cfap99A0A140LIX9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.28■■□□□ 1.8
Cfap99A0A140LIX9 Gm43566-201ENSMUST00000196851 808 ntBASIC26.28■■□□□ 1.8
Cfap99A0A140LIX9 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.28■■□□□ 1.8
Cfap99A0A140LIX9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cfap99A0A140LIX9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Cfap99A0A140LIX9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cfap99A0A140LIX9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
Cfap99A0A140LIX9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cfap99A0A140LIX9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cfap99A0A140LIX9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cfap99A0A140LIX9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cfap99A0A140LIX9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cfap99A0A140LIX9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cfap99A0A140LIX9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cfap99A0A140LIX9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cfap99A0A140LIX9 Gm15820-201ENSMUST00000201566 728 ntBASIC26.25■■□□□ 1.79
Cfap99A0A140LIX9 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.25■■□□□ 1.79
Cfap99A0A140LIX9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cfap99A0A140LIX9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cfap99A0A140LIX9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.24■■□□□ 1.79
Cfap99A0A140LIX9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cfap99A0A140LIX9 Gm13238-201ENSMUST00000117655 780 ntBASIC26.24■■□□□ 1.79
Cfap99A0A140LIX9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cfap99A0A140LIX9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cfap99A0A140LIX9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Cfap99A0A140LIX9 Rps24-207ENSMUST00000224568 714 ntBASIC26.22■■□□□ 1.79
Cfap99A0A140LIX9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cfap99A0A140LIX9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cfap99A0A140LIX9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Cfap99A0A140LIX9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Cfap99A0A140LIX9 Gm45444-201ENSMUST00000211394 898 ntBASIC26.21■■□□□ 1.79
Cfap99A0A140LIX9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cfap99A0A140LIX9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cfap99A0A140LIX9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Cfap99A0A140LIX9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Cfap99A0A140LIX9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.2■■□□□ 1.79
Cfap99A0A140LIX9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.2■■□□□ 1.78
Cfap99A0A140LIX9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Cfap99A0A140LIX9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cfap99A0A140LIX9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cfap99A0A140LIX9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.19■■□□□ 1.78
Cfap99A0A140LIX9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Cfap99A0A140LIX9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.18■■□□□ 1.78
Cfap99A0A140LIX9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cfap99A0A140LIX9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.18■■□□□ 1.78
Cfap99A0A140LIX9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Cfap99A0A140LIX9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.17■■□□□ 1.78
Cfap99A0A140LIX9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cfap99A0A140LIX9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.17■■□□□ 1.78
Cfap99A0A140LIX9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cfap99A0A140LIX9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cfap99A0A140LIX9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Cfap99A0A140LIX9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cfap99A0A140LIX9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms