Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trbc1A0A0A6YWV4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trbc1A0A0A6YWV4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.27■□□□□ 0.84
Trbc1A0A0A6YWV4 Gm12366-201ENSMUST00000121722 873 ntBASIC20.27■□□□□ 0.84
Trbc1A0A0A6YWV4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.27■□□□□ 0.84
Trbc1A0A0A6YWV4 Gm27502-201ENSMUST00000183495 199 ntBASIC20.27■□□□□ 0.84
Trbc1A0A0A6YWV4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.27■□□□□ 0.84
Trbc1A0A0A6YWV4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trbc1A0A0A6YWV4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trbc1A0A0A6YWV4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.27■□□□□ 0.84
Trbc1A0A0A6YWV4 Gm5786-201ENSMUST00000085368 882 ntBASIC20.27■□□□□ 0.84
Trbc1A0A0A6YWV4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trbc1A0A0A6YWV4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trbc1A0A0A6YWV4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trbc1A0A0A6YWV4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbc1A0A0A6YWV4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.26■□□□□ 0.83
Trbc1A0A0A6YWV4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trbc1A0A0A6YWV4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbc1A0A0A6YWV4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbc1A0A0A6YWV4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbc1A0A0A6YWV4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trbc1A0A0A6YWV4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trbc1A0A0A6YWV4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trbc1A0A0A6YWV4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trbc1A0A0A6YWV4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trbc1A0A0A6YWV4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trbc1A0A0A6YWV4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trbc1A0A0A6YWV4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.25■□□□□ 0.83
Trbc1A0A0A6YWV4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trbc1A0A0A6YWV4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Trbc1A0A0A6YWV4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trbc1A0A0A6YWV4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trbc1A0A0A6YWV4 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.24■□□□□ 0.83
Trbc1A0A0A6YWV4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trbc1A0A0A6YWV4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trbc1A0A0A6YWV4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.24■□□□□ 0.83
Trbc1A0A0A6YWV4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.24■□□□□ 0.83
Trbc1A0A0A6YWV4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Trbc1A0A0A6YWV4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trbc1A0A0A6YWV4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trbc1A0A0A6YWV4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trbc1A0A0A6YWV4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trbc1A0A0A6YWV4 Gm14523-201ENSMUST00000117260 558 ntBASIC20.23■□□□□ 0.83
Trbc1A0A0A6YWV4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trbc1A0A0A6YWV4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trbc1A0A0A6YWV4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trbc1A0A0A6YWV4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trbc1A0A0A6YWV4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trbc1A0A0A6YWV4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trbc1A0A0A6YWV4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trbc1A0A0A6YWV4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbc1A0A0A6YWV4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Trbc1A0A0A6YWV4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.2■□□□□ 0.82
Trbc1A0A0A6YWV4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Trbc1A0A0A6YWV4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbc1A0A0A6YWV4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 Gm7332-201ENSMUST00000118351 454 ntBASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbc1A0A0A6YWV4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trbc1A0A0A6YWV4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trbc1A0A0A6YWV4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trbc1A0A0A6YWV4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.17■□□□□ 0.82
Trbc1A0A0A6YWV4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trbc1A0A0A6YWV4 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.17■□□□□ 0.82
Trbc1A0A0A6YWV4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trbc1A0A0A6YWV4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trbc1A0A0A6YWV4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trbc1A0A0A6YWV4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.16■□□□□ 0.82
Trbc1A0A0A6YWV4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trbc1A0A0A6YWV4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trbc1A0A0A6YWV4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trbc1A0A0A6YWV4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trbc1A0A0A6YWV4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trbc1A0A0A6YWV4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.15■□□□□ 0.82
Trbc1A0A0A6YWV4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trbc1A0A0A6YWV4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trbc1A0A0A6YWV4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trbc1A0A0A6YWV4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Trbc1A0A0A6YWV4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.14■□□□□ 0.81
Trbc1A0A0A6YWV4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trbc1A0A0A6YWV4 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.13■□□□□ 0.81
Trbc1A0A0A6YWV4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trbc1A0A0A6YWV4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trbc1A0A0A6YWV4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trbc1A0A0A6YWV4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbc1A0A0A6YWV4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trbc1A0A0A6YWV4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.12■□□□□ 0.81
Trbc1A0A0A6YWV4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trbc1A0A0A6YWV4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trbc1A0A0A6YWV4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms