Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Trav16A0A075B653 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16A0A075B653 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav16A0A075B653 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16A0A075B653 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16A0A075B653 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav16A0A075B653 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16A0A075B653 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav16A0A075B653 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav16A0A075B653 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav16A0A075B653 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav16A0A075B653 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav16A0A075B653 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav16A0A075B653 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav16A0A075B653 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav16A0A075B653 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav16A0A075B653 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav16A0A075B653 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav16A0A075B653 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav16A0A075B653 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav16A0A075B653 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17■□□□□ 0.31
Trav16A0A075B653 Gm45855-201ENSMUST00000212546 880 ntBASIC17■□□□□ 0.31
Trav16A0A075B653 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav16A0A075B653 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav16A0A075B653 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
Trav16A0A075B653 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav16A0A075B653 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav16A0A075B653 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav16A0A075B653 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav16A0A075B653 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.99■□□□□ 0.31
Trav16A0A075B653 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav16A0A075B653 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav16A0A075B653 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav16A0A075B653 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav16A0A075B653 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav16A0A075B653 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav16A0A075B653 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav16A0A075B653 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.97■□□□□ 0.31
Trav16A0A075B653 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav16A0A075B653 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav16A0A075B653 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.97■□□□□ 0.31
Trav16A0A075B653 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav16A0A075B653 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav16A0A075B653 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav16A0A075B653 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav16A0A075B653 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav16A0A075B653 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav16A0A075B653 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav16A0A075B653 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav16A0A075B653 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav16A0A075B653 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav16A0A075B653 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav16A0A075B653 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav16A0A075B653 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav16A0A075B653 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav16A0A075B653 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav16A0A075B653 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav16A0A075B653 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav16A0A075B653 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav16A0A075B653 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav16A0A075B653 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav16A0A075B653 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav16A0A075B653 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav16A0A075B653 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav16A0A075B653 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav16A0A075B653 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav16A0A075B653 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav16A0A075B653 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav16A0A075B653 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav16A0A075B653 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Trav16A0A075B653 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav16A0A075B653 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav16A0A075B653 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav16A0A075B653 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
Trav16A0A075B653 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav16A0A075B653 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav16A0A075B653 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav16A0A075B653 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav16A0A075B653 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav16A0A075B653 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav16A0A075B653 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav16A0A075B653 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav16A0A075B653 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav16A0A075B653 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav16A0A075B653 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav16A0A075B653 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.9■□□□□ 0.3
Trav16A0A075B653 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav16A0A075B653 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav16A0A075B653 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav16A0A075B653 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav16A0A075B653 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav16A0A075B653 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav16A0A075B653 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav16A0A075B653 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav16A0A075B653 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav16A0A075B653 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav16A0A075B653 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav16A0A075B653 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
Trav16A0A075B653 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav16A0A075B653 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms