Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.04■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.02■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15-2-dv6-2A0A075B650 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.02■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.98■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.98■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.97■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15-2-dv6-2A0A075B650 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.93■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.93■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.91■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.91■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15-2-dv6-2A0A075B650 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms