Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav6-7-dv9A0A075B639 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.58■□□□□ 0.73
Trav6-7-dv9A0A075B639 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav6-7-dv9A0A075B639 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav6-7-dv9A0A075B639 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trav6-7-dv9A0A075B639 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav6-7-dv9A0A075B639 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.57■□□□□ 0.72
Trav6-7-dv9A0A075B639 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-7-dv9A0A075B639 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-7-dv9A0A075B639 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.57■□□□□ 0.72
Trav6-7-dv9A0A075B639 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.57■□□□□ 0.72
Trav6-7-dv9A0A075B639 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-7-dv9A0A075B639 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-7-dv9A0A075B639 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.57■□□□□ 0.72
Trav6-7-dv9A0A075B639 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-7-dv9A0A075B639 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trav6-7-dv9A0A075B639 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.56■□□□□ 0.72
Trav6-7-dv9A0A075B639 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.56■□□□□ 0.72
Trav6-7-dv9A0A075B639 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6-7-dv9A0A075B639 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-7-dv9A0A075B639 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trav6-7-dv9A0A075B639 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-7-dv9A0A075B639 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-7-dv9A0A075B639 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-7-dv9A0A075B639 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6-7-dv9A0A075B639 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.54■□□□□ 0.72
Trav6-7-dv9A0A075B639 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.54■□□□□ 0.72
Trav6-7-dv9A0A075B639 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6-7-dv9A0A075B639 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav6-7-dv9A0A075B639 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav6-7-dv9A0A075B639 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.53■□□□□ 0.72
Trav6-7-dv9A0A075B639 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav6-7-dv9A0A075B639 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6-7-dv9A0A075B639 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6-7-dv9A0A075B639 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6-7-dv9A0A075B639 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.52■□□□□ 0.72
Trav6-7-dv9A0A075B639 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6-7-dv9A0A075B639 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6-7-dv9A0A075B639 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6-7-dv9A0A075B639 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6-7-dv9A0A075B639 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6-7-dv9A0A075B639 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trav6-7-dv9A0A075B639 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav6-7-dv9A0A075B639 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trav6-7-dv9A0A075B639 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-7-dv9A0A075B639 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-7-dv9A0A075B639 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-7-dv9A0A075B639 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-7-dv9A0A075B639 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trav6-7-dv9A0A075B639 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-7-dv9A0A075B639 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.51■□□□□ 0.71
Trav6-7-dv9A0A075B639 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6-7-dv9A0A075B639 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trav6-7-dv9A0A075B639 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trav6-7-dv9A0A075B639 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Trav6-7-dv9A0A075B639 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6-7-dv9A0A075B639 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-7-dv9A0A075B639 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trav6-7-dv9A0A075B639 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.49■□□□□ 0.71
Trav6-7-dv9A0A075B639 Gm44428-201ENSMUST00000204474 874 ntBASIC19.49■□□□□ 0.71
Trav6-7-dv9A0A075B639 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-7-dv9A0A075B639 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-7-dv9A0A075B639 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trav6-7-dv9A0A075B639 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-7-dv9A0A075B639 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-7-dv9A0A075B639 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-7-dv9A0A075B639 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6-7-dv9A0A075B639 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6-7-dv9A0A075B639 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6-7-dv9A0A075B639 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6-7-dv9A0A075B639 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6-7-dv9A0A075B639 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.48■□□□□ 0.71
Trav6-7-dv9A0A075B639 Gm22567-201ENSMUST00000175542 342 ntBASIC19.48■□□□□ 0.71
Trav6-7-dv9A0A075B639 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trav6-7-dv9A0A075B639 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6-7-dv9A0A075B639 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6-7-dv9A0A075B639 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trav6-7-dv9A0A075B639 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6-7-dv9A0A075B639 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6-7-dv9A0A075B639 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6-7-dv9A0A075B639 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6-7-dv9A0A075B639 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6-7-dv9A0A075B639 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6-7-dv9A0A075B639 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6-7-dv9A0A075B639 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6-7-dv9A0A075B639 Gm9806-201ENSMUST00000051080 552 ntBASIC19.45■□□□□ 0.7
Trav6-7-dv9A0A075B639 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6-7-dv9A0A075B639 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trav6-7-dv9A0A075B639 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6-7-dv9A0A075B639 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6-7-dv9A0A075B639 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.44■□□□□ 0.7
Trav6-7-dv9A0A075B639 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6-7-dv9A0A075B639 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.44■□□□□ 0.7
Trav6-7-dv9A0A075B639 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6-7-dv9A0A075B639 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6-7-dv9A0A075B639 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6-7-dv9A0A075B639 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6-7-dv9A0A075B639 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trav6-7-dv9A0A075B639 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trav6-7-dv9A0A075B639 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms