Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav15d-1-dv6d-1A0A075B624 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.75■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.72■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.72■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.72■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.71■□□□□ 0.59
Trav15d-1-dv6d-1A0A075B624 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.7■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.7■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.68■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.67■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.67■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.65■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.65■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trav15d-1-dv6d-1A0A075B624 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.64■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.63■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.63■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.63■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav15d-1-dv6d-1A0A075B624 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms