Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn9Q9Z0S7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Mir8117-201ENSMUST00000184773 107 ntBASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn9Q9Z0S7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Gm44492-201ENSMUST00000197012 141 ntBASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn9Q9Z0S7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Gm14042-201ENSMUST00000120139 833 ntBASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Gm12260-201ENSMUST00000122447 411 ntBASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Gm45098-201ENSMUST00000207179 657 ntBASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms