Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Gm12008-201ENSMUST00000117791 755 ntBASIC13.73□□□□□ -0.21
Trim3Q9R1R2 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Gm2756-201ENSMUST00000195851 400 ntBASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Gm44492-201ENSMUST00000197012 141 ntBASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Gm24513-201ENSMUST00000174964 138 ntBASIC13.72□□□□□ -0.21
Trim3Q9R1R2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Gm45747-201ENSMUST00000212203 999 ntBASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Carlr-201ENSMUST00000181515 2574 ntBASIC13.72□□□□□ -0.21
Trim3Q9R1R2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Gm17271-201ENSMUST00000165535 355 ntBASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Gm27702-201ENSMUST00000184512 56 ntBASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Gm27397-201ENSMUST00000184997 107 ntBASIC13.71□□□□□ -0.21
Trim3Q9R1R2 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim3Q9R1R2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim3Q9R1R2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim3Q9R1R2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim3Q9R1R2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.71□□□□□ -0.22
Trim3Q9R1R2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim3Q9R1R2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim3Q9R1R2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim3Q9R1R2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms