Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1aQ9QWF0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chaf1aQ9QWF0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Chaf1aQ9QWF0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Chaf1aQ9QWF0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Chaf1aQ9QWF0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chaf1aQ9QWF0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chaf1aQ9QWF0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chaf1aQ9QWF0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1aQ9QWF0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1aQ9QWF0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1aQ9QWF0 Gm23547-201ENSMUST00000158210 271 ntBASIC16.33■□□□□ 0.2
Chaf1aQ9QWF0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1aQ9QWF0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Chaf1aQ9QWF0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.33■□□□□ 0.2
Chaf1aQ9QWF0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Chaf1aQ9QWF0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Chaf1aQ9QWF0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chaf1aQ9QWF0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Gm5864-201ENSMUST00000202263 970 ntBASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chaf1aQ9QWF0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chaf1aQ9QWF0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms