Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Rnf111Q99ML9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Rnf111Q99ML9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Rnf111Q99ML9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Gm27300-201ENSMUST00000184085 97 ntBASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Gm27335-201ENSMUST00000184758 97 ntBASIC14.14□□□□□ -0.15
Rnf111Q99ML9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf111Q99ML9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf111Q99ML9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms