Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx6-1Q99MA9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Gm12742-201ENSMUST00000117326 410 ntBASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Mir125a-201ENSMUST00000083545 68 ntBASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx6-1Q99MA9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Mir1982-201ENSMUST00000157368 74 ntBASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx6-1Q99MA9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms