Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Gm9824-201ENSMUST00000178707 561 ntBASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Gm7063-201ENSMUST00000186840 981 ntBASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ndc1Q8VCB1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ndc1Q8VCB1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Gm6415-201ENSMUST00000118488 348 ntBASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Gm27622-201ENSMUST00000183779 60 ntBASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Mir7023-201ENSMUST00000185093 64 ntBASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms