Protein–RNA interactions for Protein: Q8R316

Hbp1, HMG box-containing protein 1, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbp1Q8R316 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.42□□□□□ -0.1
Hbp1Q8R316 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hbp1Q8R316 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Gm6222-201ENSMUST00000120787 396 ntBASIC14.41□□□□□ -0.1
Hbp1Q8R316 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Gm27680-201ENSMUST00000184192 160 ntBASIC14.41□□□□□ -0.1
Hbp1Q8R316 Gm37230-201ENSMUST00000194491 818 ntBASIC14.41□□□□□ -0.1
Hbp1Q8R316 Gm44344-201ENSMUST00000200287 129 ntBASIC14.41□□□□□ -0.1
Hbp1Q8R316 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.41□□□□□ -0.1
Hbp1Q8R316 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hbp1Q8R316 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Mir6977-201ENSMUST00000184960 64 ntBASIC14.4□□□□□ -0.1
Hbp1Q8R316 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hbp1Q8R316 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Hbp1Q8R316 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Hbp1Q8R316 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hbp1Q8R316 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hbp1Q8R316 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hbp1Q8R316 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hbp1Q8R316 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hbp1Q8R316 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hbp1Q8R316 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hbp1Q8R316 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hbp1Q8R316 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms