Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Chmp7Q8R1T1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp7Q8R1T1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp7Q8R1T1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp7Q8R1T1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp7Q8R1T1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.58■□□□□ 0.57
Chmp7Q8R1T1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp7Q8R1T1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Gm12091-201ENSMUST00000146791 830 ntBASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Gm10275-202ENSMUST00000168697 495 ntBASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Gm33320-201ENSMUST00000192232 530 ntBASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Gm37917-201ENSMUST00000194711 392 ntBASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Gm15823-201ENSMUST00000064305 670 ntBASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Gm10275-201ENSMUST00000092620 635 ntBASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp7Q8R1T1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Gm10766-202ENSMUST00000194123 606 ntBASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.57■□□□□ 0.56
Chmp7Q8R1T1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Gm45668-201ENSMUST00000211271 493 ntBASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp7Q8R1T1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Gm6912-201ENSMUST00000117218 544 ntBASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Gm12585-201ENSMUST00000117307 290 ntBASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Gm15393-201ENSMUST00000120499 219 ntBASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Gm18187-201ENSMUST00000196476 984 ntBASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms