Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxc12Q8K5B8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Mir6956-201ENSMUST00000183598 62 ntBASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Gm7774-201ENSMUST00000200064 533 ntBASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.23□□□□□ -0.45
Hoxc12Q8K5B8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms