Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Efs-202ENSMUST00000227037 2540 ntBASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf31Q8CCF0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Prpf31Q8CCF0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Gm5566-201ENSMUST00000116118 459 ntBASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Gm6888-201ENSMUST00000221983 706 ntBASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf31Q8CCF0 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.9■□□□□ 0.14
Prpf31Q8CCF0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Prpf31Q8CCF0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf31Q8CCF0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf31Q8CCF0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf31Q8CCF0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf31Q8CCF0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf31Q8CCF0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms