Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Gm27306-201ENSMUST00000183970 107 ntBASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Alx1Q8C8B0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Alx1Q8C8B0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.96■□□□□ 0.3
Alx1Q8C8B0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Alx1Q8C8B0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Alx1Q8C8B0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Alx1Q8C8B0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Alx1Q8C8B0 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.94■□□□□ 0.3
Alx1Q8C8B0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Gm27680-201ENSMUST00000184192 160 ntBASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Alx1Q8C8B0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms