Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.04■□□□□ -0
Trub1Q8C0D0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trub1Q8C0D0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trub1Q8C0D0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trub1Q8C0D0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.04■□□□□ -0
Trub1Q8C0D0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trub1Q8C0D0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.03■□□□□ -0
Trub1Q8C0D0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.03■□□□□ -0
Trub1Q8C0D0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.03■□□□□ -0
Trub1Q8C0D0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
Trub1Q8C0D0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Trub1Q8C0D0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Trub1Q8C0D0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
Trub1Q8C0D0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trub1Q8C0D0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trub1Q8C0D0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.02■□□□□ -0
Trub1Q8C0D0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trub1Q8C0D0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trub1Q8C0D0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trub1Q8C0D0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trub1Q8C0D0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trub1Q8C0D0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trub1Q8C0D0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trub1Q8C0D0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trub1Q8C0D0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trub1Q8C0D0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trub1Q8C0D0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Trub1Q8C0D0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trub1Q8C0D0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.02■□□□□ -0
Trub1Q8C0D0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trub1Q8C0D0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.02■□□□□ -0
Trub1Q8C0D0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.02■□□□□ -0
Trub1Q8C0D0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trub1Q8C0D0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.02■□□□□ -0
Trub1Q8C0D0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.02■□□□□ -0
Trub1Q8C0D0 Gm45612-201ENSMUST00000211320 160 ntBASIC15.02■□□□□ -0
Trub1Q8C0D0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Trub1Q8C0D0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms