Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm9727-201ENSMUST00000161387 555 ntBASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc116Q80X53 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc116Q80X53 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc116Q80X53 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Gm15483-201ENSMUST00000120338 456 ntBASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc116Q80X53 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms