Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Gm43094-201ENSMUST00000196549 921 ntBASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Gm8775-201ENSMUST00000170943 1327 ntBASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Gm12485-201ENSMUST00000119641 291 ntBASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd4Q6PDQ2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd4Q6PDQ2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Gm15806-201ENSMUST00000120696 955 ntBASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd4Q6PDQ2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Gm13226-201ENSMUST00000117838 404 ntBASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Gm11803-201ENSMUST00000119966 444 ntBASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Gm43630-201ENSMUST00000201550 776 ntBASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Gm8598-201ENSMUST00000221184 836 ntBASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Gm21038-201ENSMUST00000222205 1383 ntBASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms