Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.03□□□□□ -0.16
Sdc3Q64519 Gm25948-201ENSMUST00000175334 112 ntBASIC14.03□□□□□ -0.16
Sdc3Q64519 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sdc3Q64519 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.03□□□□□ -0.16
Sdc3Q64519 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.03□□□□□ -0.16
Sdc3Q64519 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.03□□□□□ -0.16
Sdc3Q64519 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sdc3Q64519 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.03□□□□□ -0.16
Sdc3Q64519 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sdc3Q64519 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Sdc3Q64519 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sdc3Q64519 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Sdc3Q64519 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Sdc3Q64519 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc3Q64519 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc3Q64519 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc3Q64519 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc3Q64519 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Sdc3Q64519 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.02□□□□□ -0.16
Sdc3Q64519 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.02□□□□□ -0.16
Sdc3Q64519 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc3Q64519 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.02□□□□□ -0.16
Sdc3Q64519 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Sdc3Q64519 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sdc3Q64519 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.02□□□□□ -0.17
Sdc3Q64519 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc3Q64519 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.02□□□□□ -0.17
Sdc3Q64519 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Sdc3Q64519 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc3Q64519 Gm10576-201ENSMUST00000191927 825 ntBASIC14.02□□□□□ -0.17
Sdc3Q64519 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.02□□□□□ -0.17
Sdc3Q64519 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sdc3Q64519 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.02□□□□□ -0.17
Sdc3Q64519 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc3Q64519 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Sdc3Q64519 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc3Q64519 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc3Q64519 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc3Q64519 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc3Q64519 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc3Q64519 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sdc3Q64519 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sdc3Q64519 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.02□□□□□ -0.17
Sdc3Q64519 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Sdc3Q64519 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sdc3Q64519 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sdc3Q64519 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sdc3Q64519 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.01□□□□□ -0.17
Sdc3Q64519 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Mir6956-201ENSMUST00000183598 62 ntBASIC14.01□□□□□ -0.17
Sdc3Q64519 Gm7774-201ENSMUST00000200064 533 ntBASIC14.01□□□□□ -0.17
Sdc3Q64519 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.01□□□□□ -0.17
Sdc3Q64519 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.01□□□□□ -0.17
Sdc3Q64519 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.01□□□□□ -0.17
Sdc3Q64519 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sdc3Q64519 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms