Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm27622-201ENSMUST00000183779 60 ntBASIC17.18■□□□□ 0.34
Ctr9Q62018 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ctr9Q62018 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ctr9Q62018 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ctr9Q62018 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Ctr9Q62018 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ctr9Q62018 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ctr9Q62018 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ctr9Q62018 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.17■□□□□ 0.34
Ctr9Q62018 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.17■□□□□ 0.34
Ctr9Q62018 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Ctr9Q62018 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ctr9Q62018 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ctr9Q62018 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ctr9Q62018 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ctr9Q62018 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ctr9Q62018 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.17■□□□□ 0.34
Ctr9Q62018 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.17■□□□□ 0.34
Ctr9Q62018 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Ctr9Q62018 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
Ctr9Q62018 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ctr9Q62018 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.16■□□□□ 0.34
Ctr9Q62018 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Ctr9Q62018 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ctr9Q62018 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ctr9Q62018 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.16■□□□□ 0.34
Ctr9Q62018 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.16■□□□□ 0.34
Ctr9Q62018 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.16■□□□□ 0.34
Ctr9Q62018 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.16■□□□□ 0.34
Ctr9Q62018 Gm20949-201ENSMUST00000206478 952 ntBASIC17.16■□□□□ 0.34
Ctr9Q62018 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ctr9Q62018 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ctr9Q62018 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.15■□□□□ 0.34
Ctr9Q62018 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ctr9Q62018 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Ctr9Q62018 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.15■□□□□ 0.34
Ctr9Q62018 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.15■□□□□ 0.34
Ctr9Q62018 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.15■□□□□ 0.34
Ctr9Q62018 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ctr9Q62018 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.15■□□□□ 0.34
Ctr9Q62018 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.15■□□□□ 0.34
Ctr9Q62018 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.15■□□□□ 0.34
Ctr9Q62018 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ctr9Q62018 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ctr9Q62018 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ctr9Q62018 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ctr9Q62018 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.14■□□□□ 0.34
Ctr9Q62018 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.14■□□□□ 0.33
Ctr9Q62018 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms