Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.23□□□□□ -0.13
Vsx2Q61412 Gm12134-201ENSMUST00000122109 520 ntBASIC14.23□□□□□ -0.13
Vsx2Q61412 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.23□□□□□ -0.13
Vsx2Q61412 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.23□□□□□ -0.13
Vsx2Q61412 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.23□□□□□ -0.13
Vsx2Q61412 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.23□□□□□ -0.13
Vsx2Q61412 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.23□□□□□ -0.13
Vsx2Q61412 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.22□□□□□ -0.13
Vsx2Q61412 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vsx2Q61412 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.22□□□□□ -0.13
Vsx2Q61412 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.22□□□□□ -0.13
Vsx2Q61412 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.22□□□□□ -0.13
Vsx2Q61412 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.22□□□□□ -0.13
Vsx2Q61412 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vsx2Q61412 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vsx2Q61412 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Vsx2Q61412 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Vsx2Q61412 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Vsx2Q61412 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx2Q61412 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx2Q61412 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Vsx2Q61412 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx2Q61412 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx2Q61412 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx2Q61412 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx2Q61412 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx2Q61412 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.21□□□□□ -0.13
Vsx2Q61412 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Vsx2Q61412 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx2Q61412 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.21□□□□□ -0.13
Vsx2Q61412 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx2Q61412 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx2Q61412 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.21□□□□□ -0.13
Vsx2Q61412 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx2Q61412 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx2Q61412 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.21□□□□□ -0.13
Vsx2Q61412 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.21□□□□□ -0.13
Vsx2Q61412 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.21□□□□□ -0.13
Vsx2Q61412 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.21□□□□□ -0.13
Vsx2Q61412 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.21□□□□□ -0.13
Vsx2Q61412 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Vsx2Q61412 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vsx2Q61412 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vsx2Q61412 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vsx2Q61412 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.21□□□□□ -0.14
Vsx2Q61412 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms