Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ClpbQ60649 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ClpbQ60649 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.01□□□□□ -0.17
ClpbQ60649 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClpbQ60649 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ClpbQ60649 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14□□□□□ -0.17
ClpbQ60649 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ClpbQ60649 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ClpbQ60649 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14□□□□□ -0.17
ClpbQ60649 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14□□□□□ -0.17
ClpbQ60649 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Gm25925-201ENSMUST00000158314 306 ntBASIC14□□□□□ -0.17
ClpbQ60649 Gm45612-201ENSMUST00000211320 160 ntBASIC14□□□□□ -0.17
ClpbQ60649 Chchd1-203ENSMUST00000224633 557 ntBASIC14□□□□□ -0.17
ClpbQ60649 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14□□□□□ -0.17
ClpbQ60649 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpbQ60649 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
ClpbQ60649 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ClpbQ60649 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.99□□□□□ -0.17
ClpbQ60649 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.99□□□□□ -0.17
ClpbQ60649 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.99□□□□□ -0.17
ClpbQ60649 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ClpbQ60649 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ClpbQ60649 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpbQ60649 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
ClpbQ60649 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
ClpbQ60649 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ClpbQ60649 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
ClpbQ60649 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.98□□□□□ -0.17
ClpbQ60649 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.98□□□□□ -0.17
ClpbQ60649 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.98□□□□□ -0.17
ClpbQ60649 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.98□□□□□ -0.17
ClpbQ60649 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.98□□□□□ -0.17
ClpbQ60649 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ClpbQ60649 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.98□□□□□ -0.17
ClpbQ60649 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClpbQ60649 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 128.9 ms