Protein–RNA interactions for Protein: Q60644

Nr1h2, Oxysterols receptor LXR-beta, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h2Q60644 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h2Q60644 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h2Q60644 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.33□□□□□ -0.11
Nr1h2Q60644 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h2Q60644 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1h2Q60644 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.33□□□□□ -0.12
Nr1h2Q60644 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Gm23547-201ENSMUST00000158210 271 ntBASIC14.33□□□□□ -0.12
Nr1h2Q60644 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.33□□□□□ -0.12
Nr1h2Q60644 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.33□□□□□ -0.12
Nr1h2Q60644 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1h2Q60644 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.32□□□□□ -0.12
Nr1h2Q60644 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1h2Q60644 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.31□□□□□ -0.12
Nr1h2Q60644 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.31□□□□□ -0.12
Nr1h2Q60644 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.31□□□□□ -0.12
Nr1h2Q60644 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
Nr1h2Q60644 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1h2Q60644 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms