Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Gm27437-201ENSMUST00000183429 107 ntBASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Mir6977-201ENSMUST00000184960 64 ntBASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Gm43703-201ENSMUST00000200523 763 ntBASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Gm2423-201ENSMUST00000074863 733 ntBASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rc3h1Q4VGL6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Gm46209-201ENSMUST00000217912 553 ntBASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rc3h1Q4VGL6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms