Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Spg7Q3ULF4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Spg7Q3ULF4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Spg7Q3ULF4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Spg7Q3ULF4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Spg7Q3ULF4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Gm6218-201ENSMUST00000219812 628 ntBASIC17.29■□□□□ 0.36
Spg7Q3ULF4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Spg7Q3ULF4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Spg7Q3ULF4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Spg7Q3ULF4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Spg7Q3ULF4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Spg7Q3ULF4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Spg7Q3ULF4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Spg7Q3ULF4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Spg7Q3ULF4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Spg7Q3ULF4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms