Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Apoa1Q00623 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.8□□□□□ -0.2
Apoa1Q00623 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.8□□□□□ -0.2
Apoa1Q00623 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.8□□□□□ -0.2
Apoa1Q00623 Gm5682-201ENSMUST00000173402 505 ntBASIC13.8□□□□□ -0.2
Apoa1Q00623 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.8□□□□□ -0.2
Apoa1Q00623 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Gm18669-201ENSMUST00000216049 778 ntBASIC13.8□□□□□ -0.2
Apoa1Q00623 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Apoa1Q00623 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Apoa1Q00623 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Apoa1Q00623 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Apoa1Q00623 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.79□□□□□ -0.2
Apoa1Q00623 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Apoa1Q00623 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Apoa1Q00623 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Apoa1Q00623 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Apoa1Q00623 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm44357-201ENSMUST00000195897 142 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm19658-201ENSMUST00000196231 138 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm44367-201ENSMUST00000196836 138 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm44350-201ENSMUST00000197197 138 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm44390-201ENSMUST00000197533 144 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm44313-201ENSMUST00000198018 138 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm44486-201ENSMUST00000198508 138 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm44314-201ENSMUST00000199263 138 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm44394-201ENSMUST00000199558 138 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm44484-201ENSMUST00000199873 138 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm44466-201ENSMUST00000200264 138 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm44359-201ENSMUST00000200671 138 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Apoa1Q00623 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.79□□□□□ -0.2
Apoa1Q00623 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Apoa1Q00623 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.79□□□□□ -0.2
Apoa1Q00623 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Apoa1Q00623 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Apoa1Q00623 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.78□□□□□ -0.2
Apoa1Q00623 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.78□□□□□ -0.2
Apoa1Q00623 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Apoa1Q00623 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Apoa1Q00623 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Gm25990-201ENSMUST00000102440 86 ntBASIC13.78□□□□□ -0.2
Apoa1Q00623 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Apoa1Q00623 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Apoa1Q00623 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Apoa1Q00623 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms