Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Rpl39P62892 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Rpl39P62892 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Rpl39P62892 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Rpl39P62892 Gm8655-201ENSMUST00000221159 852 ntBASIC10.4□□□□□ -0.74
Rpl39P62892 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rpl39P62892 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC10.4□□□□□ -0.74
Rpl39P62892 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rpl39P62892 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rpl39P62892 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rpl39P62892 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rpl39P62892 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Rpl39P62892 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.4□□□□□ -0.74
Rpl39P62892 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.4□□□□□ -0.74
Rpl39P62892 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Rpl39P62892 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rpl39P62892 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rpl39P62892 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Rpl39P62892 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.4□□□□□ -0.74
Rpl39P62892 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rpl39P62892 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rpl39P62892 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rpl39P62892 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rpl39P62892 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rpl39P62892 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rpl39P62892 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rpl39P62892 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rpl39P62892 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rpl39P62892 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
Rpl39P62892 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.75
Rpl39P62892 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Rpl39P62892 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rpl39P62892 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Rpl39P62892 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.39□□□□□ -0.75
Rpl39P62892 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Rpl39P62892 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.39□□□□□ -0.75
Rpl39P62892 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.39□□□□□ -0.75
Rpl39P62892 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC10.39□□□□□ -0.75
Rpl39P62892 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.39□□□□□ -0.75
Rpl39P62892 Gm25016-201ENSMUST00000158399 131 ntBASIC10.39□□□□□ -0.75
Rpl39P62892 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC10.39□□□□□ -0.75
Rpl39P62892 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.39□□□□□ -0.75
Rpl39P62892 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.39□□□□□ -0.75
Rpl39P62892 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.39□□□□□ -0.75
Rpl39P62892 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rpl39P62892 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rpl39P62892 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rpl39P62892 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.38□□□□□ -0.75
Rpl39P62892 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.38□□□□□ -0.75
Rpl39P62892 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Rpl39P62892 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.38□□□□□ -0.75
Rpl39P62892 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms