Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup43P59235 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.77□□□□□ -0.21
Nup43P59235 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup43P59235 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup43P59235 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.77□□□□□ -0.21
Nup43P59235 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup43P59235 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nup43P59235 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup43P59235 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup43P59235 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup43P59235 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.76□□□□□ -0.21
Nup43P59235 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nup43P59235 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nup43P59235 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.76□□□□□ -0.21
Nup43P59235 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.76□□□□□ -0.21
Nup43P59235 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.76□□□□□ -0.21
Nup43P59235 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.76□□□□□ -0.21
Nup43P59235 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.76□□□□□ -0.21
Nup43P59235 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.76□□□□□ -0.21
Nup43P59235 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.76□□□□□ -0.21
Nup43P59235 Gm38225-201ENSMUST00000194001 393 ntBASIC13.76□□□□□ -0.21
Nup43P59235 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Nup43P59235 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup43P59235 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.76□□□□□ -0.21
Nup43P59235 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nup43P59235 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nup43P59235 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Gm26308-201ENSMUST00000157768 69 ntBASIC13.75□□□□□ -0.21
Nup43P59235 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.75□□□□□ -0.21
Nup43P59235 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Gm43125-201ENSMUST00000201724 730 ntBASIC13.75□□□□□ -0.21
Nup43P59235 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.75□□□□□ -0.21
Nup43P59235 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Nup43P59235 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.75□□□□□ -0.21
Nup43P59235 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nup43P59235 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.75□□□□□ -0.21
Nup43P59235 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup43P59235 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nup43P59235 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nup43P59235 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Nup43P59235 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.74□□□□□ -0.21
Nup43P59235 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup43P59235 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup43P59235 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.74□□□□□ -0.21
Nup43P59235 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms