Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rab4aP56371 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rab4aP56371 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rab4aP56371 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Rab4aP56371 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rab4aP56371 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.52□□□□□ -0.57
Rab4aP56371 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rab4aP56371 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Rab4aP56371 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.52□□□□□ -0.57
Rab4aP56371 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.52□□□□□ -0.57
Rab4aP56371 Trmt13-210ENSMUST00000198454 880 ntBASIC11.52□□□□□ -0.57
Rab4aP56371 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.52□□□□□ -0.57
Rab4aP56371 Timm23-208ENSMUST00000226683 750 ntBASIC11.52□□□□□ -0.57
Rab4aP56371 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rab4aP56371 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rab4aP56371 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.52□□□□□ -0.57
Rab4aP56371 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rab4aP56371 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Rab4aP56371 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.52□□□□□ -0.57
Rab4aP56371 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.52□□□□□ -0.57
Rab4aP56371 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rab4aP56371 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rab4aP56371 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rab4aP56371 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rab4aP56371 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.51□□□□□ -0.57
Rab4aP56371 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.51□□□□□ -0.57
Rab4aP56371 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.51□□□□□ -0.57
Rab4aP56371 Gm37856-201ENSMUST00000191634 999 ntBASIC11.51□□□□□ -0.57
Rab4aP56371 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rab4aP56371 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Rab4aP56371 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.51□□□□□ -0.57
Rab4aP56371 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rab4aP56371 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.51□□□□□ -0.57
Rab4aP56371 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.51□□□□□ -0.57
Rab4aP56371 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rab4aP56371 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab4aP56371 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab4aP56371 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab4aP56371 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab4aP56371 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab4aP56371 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rab4aP56371 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rab4aP56371 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab4aP56371 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.5□□□□□ -0.57
Rab4aP56371 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rab4aP56371 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab4aP56371 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.5□□□□□ -0.57
Rab4aP56371 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms