Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.08□□□□□ -0.16
Tnfsf4P43488 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.08□□□□□ -0.16
Tnfsf4P43488 Gm10060-201ENSMUST00000212002 111 ntBASIC14.08□□□□□ -0.16
Tnfsf4P43488 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.07□□□□□ -0.16
Tnfsf4P43488 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.07□□□□□ -0.16
Tnfsf4P43488 Gm11452-201ENSMUST00000122376 690 ntBASIC14.07□□□□□ -0.16
Tnfsf4P43488 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.07□□□□□ -0.16
Tnfsf4P43488 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.07□□□□□ -0.16
Tnfsf4P43488 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf4P43488 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.06□□□□□ -0.16
Tnfsf4P43488 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tnfsf4P43488 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.06□□□□□ -0.16
Tnfsf4P43488 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.06□□□□□ -0.16
Tnfsf4P43488 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.06□□□□□ -0.16
Tnfsf4P43488 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.05□□□□□ -0.16
Tnfsf4P43488 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms