Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdx2P43241 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdx2P43241 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdx2P43241 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.78□□□□□ -0.2
Cdx2P43241 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Cdx2P43241 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Gm9002-201ENSMUST00000178437 499 ntBASIC13.78□□□□□ -0.2
Cdx2P43241 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdx2P43241 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.78□□□□□ -0.2
Cdx2P43241 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.78□□□□□ -0.2
Cdx2P43241 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.78□□□□□ -0.2
Cdx2P43241 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.78□□□□□ -0.2
Cdx2P43241 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Cdx2P43241 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdx2P43241 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdx2P43241 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.78□□□□□ -0.2
Cdx2P43241 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdx2P43241 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdx2P43241 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cdx2P43241 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdx2P43241 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.77□□□□□ -0.2
Cdx2P43241 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Cdx2P43241 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.77□□□□□ -0.21
Cdx2P43241 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.77□□□□□ -0.21
Cdx2P43241 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.77□□□□□ -0.21
Cdx2P43241 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.77□□□□□ -0.21
Cdx2P43241 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Cdx2P43241 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cdx2P43241 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Gm5354-201ENSMUST00000182417 973 ntBASIC13.77□□□□□ -0.21
Cdx2P43241 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.77□□□□□ -0.21
Cdx2P43241 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.77□□□□□ -0.21
Cdx2P43241 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.77□□□□□ -0.21
Cdx2P43241 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.77□□□□□ -0.21
Cdx2P43241 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdx2P43241 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cdx2P43241 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cdx2P43241 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx2P43241 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdx2P43241 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdx2P43241 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdx2P43241 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx2P43241 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms