Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rom1P32958 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Rom1P32958 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Rom1P32958 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Rom1P32958 Gm6345-202ENSMUST00000180900 204 ntBASIC11.53□□□□□ -0.56
Rom1P32958 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Rom1P32958 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.53□□□□□ -0.56
Rom1P32958 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rom1P32958 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rom1P32958 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rom1P32958 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rom1P32958 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rom1P32958 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Rom1P32958 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rom1P32958 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rom1P32958 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rom1P32958 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rom1P32958 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rom1P32958 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rom1P32958 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rom1P32958 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
Rom1P32958 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.52□□□□□ -0.57
Rom1P32958 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.52□□□□□ -0.57
Rom1P32958 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.52□□□□□ -0.57
Rom1P32958 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.52□□□□□ -0.57
Rom1P32958 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.52□□□□□ -0.57
Rom1P32958 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.52□□□□□ -0.57
Rom1P32958 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rom1P32958 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rom1P32958 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.51□□□□□ -0.57
Rom1P32958 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.51□□□□□ -0.57
Rom1P32958 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
Rom1P32958 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.51□□□□□ -0.57
Rom1P32958 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.51□□□□□ -0.57
Rom1P32958 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.51□□□□□ -0.57
Rom1P32958 Gm9726-201ENSMUST00000180321 678 ntBASIC11.51□□□□□ -0.57
Rom1P32958 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.51□□□□□ -0.57
Rom1P32958 Gm17808-201ENSMUST00000200859 894 ntBASIC11.51□□□□□ -0.57
Rom1P32958 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.51□□□□□ -0.57
Rom1P32958 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.51□□□□□ -0.57
Rom1P32958 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.51□□□□□ -0.57
Rom1P32958 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rom1P32958 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms