Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nid1P10493 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nid1P10493 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nid1P10493 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nid1P10493 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nid1P10493 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nid1P10493 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nid1P10493 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.67□□□□□ -0.22
Nid1P10493 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Nid1P10493 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nid1P10493 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.66□□□□□ -0.22
Nid1P10493 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.66□□□□□ -0.22
Nid1P10493 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Gm45098-201ENSMUST00000207179 657 ntBASIC13.66□□□□□ -0.22
Nid1P10493 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nid1P10493 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nid1P10493 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nid1P10493 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nid1P10493 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nid1P10493 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nid1P10493 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Nid1P10493 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.65□□□□□ -0.22
Nid1P10493 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Gm1401-201ENSMUST00000122048 772 ntBASIC13.65□□□□□ -0.22
Nid1P10493 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.65□□□□□ -0.22
Nid1P10493 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.65□□□□□ -0.22
Nid1P10493 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nid1P10493 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nid1P10493 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nid1P10493 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nid1P10493 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.64□□□□□ -0.23
Nid1P10493 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nid1P10493 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
Nid1P10493 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.64□□□□□ -0.23
Nid1P10493 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.64□□□□□ -0.23
Nid1P10493 Gm9727-201ENSMUST00000161387 555 ntBASIC13.64□□□□□ -0.23
Nid1P10493 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.64□□□□□ -0.23
Nid1P10493 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.64□□□□□ -0.23
Nid1P10493 Gm7461-201ENSMUST00000058918 827 ntBASIC13.64□□□□□ -0.23
Nid1P10493 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.64□□□□□ -0.23
Nid1P10493 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nid1P10493 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms