Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ly6c1P0CW02 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ly6c1P0CW02 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ly6c1P0CW02 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ly6c1P0CW02 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ly6c1P0CW02 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ly6c1P0CW02 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ly6c1P0CW02 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ly6c1P0CW02 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ly6c1P0CW02 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ly6c1P0CW02 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ly6c1P0CW02 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ly6c1P0CW02 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ly6c1P0CW02 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ly6c1P0CW02 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.21□□□□□ -0.46
Ly6c1P0CW02 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Gm13015-201ENSMUST00000118674 204 ntBASIC12.2□□□□□ -0.46
Ly6c1P0CW02 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Gm24158-201ENSMUST00000175263 71 ntBASIC12.2□□□□□ -0.46
Ly6c1P0CW02 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.2□□□□□ -0.46
Ly6c1P0CW02 AC125117.2-201ENSMUST00000228344 1140 ntBASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ly6c1P0CW02 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Gm13616-201ENSMUST00000120600 222 ntBASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Gm5244-202ENSMUST00000189517 743 ntBASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Gm10253-201ENSMUST00000194270 940 ntBASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Gm37230-201ENSMUST00000194491 818 ntBASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Gm18363-201ENSMUST00000221671 730 ntBASIC12.19□□□□□ -0.46
Ly6c1P0CW02 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ly6c1P0CW02 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ly6c1P0CW02 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ly6c1P0CW02 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ly6c1P0CW02 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Ly6c1P0CW02 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.18□□□□□ -0.46
Ly6c1P0CW02 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ly6c1P0CW02 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms